MSAReader Member List

This is the complete list of members for MSAReader, including all inherited members.

alphabet	MSAReader	protected
checkValidation	MSAReader	protected
containsInvalidLetters(Alphabet alphabet)	MSAReader	protected
file	MSAReader	protected
isUnaligned()	MSAReader	protected
makeUppercase()	MSAReader	protected
MSAReader(std::string _file, Alphabet _alphabet, bool _checkValidation, bool _omitGaps=false)	MSAReader
omitGaps	MSAReader	protected
read()	MSAReader
readFile(std::ifstream &file)=0	MSAReader	protectedpure virtual
Sequences	MSAReader	protected
validateSequences(Alphabet alphabet)	MSAReader	protected