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NEFF Calculator and MSA File Converter
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MSAReader_fasta Member List

This is the complete list of members for MSAReader_fasta, including all inherited members.

alphabetMSAReaderprotected
checkValidationMSAReaderprotected
containsInvalidLetters(Alphabet alphabet)MSAReaderprotected
fileMSAReaderprotected
isUnaligned()MSAReaderprotected
makeUppercase()MSAReaderprotected
MSAReader(std::string _file, Alphabet _alphabet, bool _checkValidation, bool _omitGaps=false)MSAReader_fasta
omitGapsMSAReaderprotected
read()MSAReader
readFile(std::ifstream &file) overrideMSAReader_fastaprivatevirtual
SequencesMSAReaderprotected
validateSequences(Alphabet alphabet)MSAReaderprotected
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