This is the complete list of members for MSAReader_pfam, including all inherited members.

alphabet	MSAReader	protected
checkValidation	MSAReader	protected
containsInvalidLetters(Alphabet alphabet)	MSAReader	protected
file	MSAReader	protected
isUnaligned()	MSAReader	protected
makeUppercase()	MSAReader	protected
MSAReader(std::string _file, Alphabet _alphabet, bool _checkValidation, bool _omitGaps=false)	MSAReader_pfam
omitGaps	MSAReader	protected
read()	MSAReader
readFile(std::ifstream &file) override	MSAReader_pfam	privatevirtual
Sequences	MSAReader	protected
validateSequences(Alphabet alphabet)	MSAReader	protected